Flower City AI 2026

Sim Agent: Building an AI Assistant for a Scientific Simulator

Tim Giles

Wednesday December 2, 2026 at The Little Theatre, Rochester, NY · 10:35AM-11:20AM

Building a scientific simulator to quantify light’s behavior for quantum-sensing is hard. Operating this type of software as a user can be even harder! At Eigenlabs, we developed an optical quantum-sensing simulator that is usable without requiring a PhD in quantum physics. To achieve this, we developed "Sim Agent:" a dual-workflow system that pairs a standard web user interface with an embedded LLM agent. The agent understands all the capabilities of the software and can configure, run, analyze, document, and discuss complex physics simulations.

This talk breaks down the architecture and lessons learned from building our domain-specific scientific assistant. We will explore key technical strategies, including crafting system prompts for strict behavioral boundaries, agent tools for deterministic math to eliminate hallucinations in precision calculations, and designing robust agent loops. We will also cover an innovative self-monitoring capability which enables the agent to automatically log edge-case failures or self-submit feature requests with full simulation parameters for instant developer reproducibility.

Attendees will gain a practical blueprint for embedding AI assistants into domain-specific software. You will learn how to: balance agent autonomy with deterministic precision, handle strict domain constraints, and implement automated feedback loops that turn agent failures into new features.

About the speaker

Tim Giles

Tim Giles

Eigenlabs

Tim Giles is a life-long engineer and maker. He has led experiments with generative AI technologies since 2023, focusing on using local inference with proprietary data sets to get real work done. Tim has over 20 years of experience engineering unique solutions with Rochester, NY based defense companies and holds 5...

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